diff --git a/.gitattributes b/.gitattributes
index e653d5b4b79..09dfc210fc7 100644
--- a/.gitattributes
+++ b/.gitattributes
@@ -1,2 +1,11 @@
+public/conf/gitignore/* linguist-vendored
+public/conf/license/* linguist-vendored
 public/assets/* linguist-vendored
-public/plugins/* linguist-vendored
\ No newline at end of file
+public/plugins/* linguist-vendored
+public/plugins/* linguist-vendored
+public/css/themes/* linguist-vendored
+public/css/github.min.css linguist-vendored
+public/css/semantic-2.2.1.min.css linguist-vendored
+public/js/libs/* linguist-vendored
+public/js/jquery-1.11.3.min.js linguist-vendored
+public/js/semantic-2.2.1.min.js linguist-vendored
\ No newline at end of file
diff --git a/public/config.codekit b/public/config.codekit
index a0a1792e586..5faa5569f16 100644
--- a/public/config.codekit
+++ b/public/config.codekit
@@ -150,17 +150,6 @@
 		"outputStyle": 1,
 		"syntaxCheckerStyle": 1
 		},
-	"\/js\/jquery.are-you-sure.js": {
-		"fileType": 64,
-		"ignore": 1,
-		"ignoreWasSetByUser": 1,
-		"inputAbbreviatedPath": "\/js\/jquery.are-you-sure.js",
-		"outputAbbreviatedPath": "\/js\/min\/jquery.are-you-sure-min.js",
-		"outputPathIsOutsideProject": 0,
-		"outputPathIsSetByUser": 0,
-		"outputStyle": 1,
-		"syntaxCheckerStyle": 1
-		},
 	"\/js\/semantic-2.2.1.min.js": {
 		"fileType": 64,
 		"ignore": 1,
diff --git a/public/js/jquery.are-you-sure.js b/public/js/libs/jquery.are-you-sure.js
similarity index 100%
rename from public/js/jquery.are-you-sure.js
rename to public/js/libs/jquery.are-you-sure.js
diff --git a/templates/base/head.tmpl b/templates/base/head.tmpl
index 5e11e9010c6..ea7b7cc1df7 100644
--- a/templates/base/head.tmpl
+++ b/templates/base/head.tmpl
@@ -17,7 +17,7 @@
 	<link rel="shortcut icon" href="{{AppSubUrl}}/img/favicon.png" />
 
 	<script src="{{AppSubUrl}}/js/jquery-1.11.3.min.js"></script>
-	<script src="{{AppSubUrl}}/js/jquery.are-you-sure.js"></script>
+	<script src="{{AppSubUrl}}/js/libs/jquery.are-you-sure.js"></script>
 	<link rel="stylesheet" href="{{AppSubUrl}}/assets/font-awesome-4.6.3/css/font-awesome.min.css">
 	<link rel="stylesheet" href="{{AppSubUrl}}/assets/octicons-4.3.0/octicons.min.css">